title: Release Notes author: SeekGene date: 2026-01-20 tags:

SeekSoul™ Tools

Release Notes

Author: SeekGene

Time: 2 min

Words: 201 words

Updated: 2026-07-23

Reads: 0 times

v1.3.0

Updates

Updated the VDJ module algorithm.
Unified output directory names.
Removed the 17 bp low-quality bases after reads1umi in the fast and ffpe modules.

v1.2.2

New Features

Added the VDJ analysis module.
Added support for FFPE samples in the fast module.

Improvements

Fixed the error in median gene statistics caused by missing lncRNA annotations in the GTF file.
Resolved the issue where duplicated gene names caused Ensembl IDs to be missing from differential gene results.
Made other improvements to enhance usability.

v1.2.1

Updates

Updated the report style.
Added trimming for SP1, SP2, TSO, and adapter sequences.
Added a utility for applying addtag to BAM files.
Enhanced support for non-standard GTF files.
Extended the fast module to support species beyond human and mouse.

v1.2.0

New Features

Added output of the read1 FASTQ file after removing barcode and UMI sequences.
Added the fast analysis module.
Introduced the UMI correction method from UMI-tools.

Improvements

Updated the rule for reads annotated to multiple genes: a read is considered valid when a unique exon annotation is present.

v1.0.0

Initial Release

First public release.