Data Preparation

Author: SeekGene

Time: 1 min

Words: 174 words

Updated: 2026-10-13

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SeekArc™ Tools

Test Data Download

For test data, refer to the Example Data documentation.

Reference Genome Downloads

Download human reference GRCh38 - MD5: a9ce266ead3d89bc0aa77cfa646ca309
Download mouse reference GRCm38 - MD5: c4f2244f1d0560d5d3b4c71da06fd08f

Download with wget

# human
wget -c -O refdata-arc-GRCh38.tar.gz "https://seekgene-public.oss-cn-beijing.aliyuncs.com/sgarc_demo/reference/refdata-arc-GRCh38.tar.gz"
# mouse
wget -c -O refdata-arc-GRCm38.tar.gz "https://seekgene-public.oss-cn-beijing.aliyuncs.com/sgarc_demo/reference/refdata-arc-GRCm38.tar.gz"
# decompress
tar -zxvf refdata-arc-GRCh38.tar.gz

Download with curl

# human
curl -C - -o refdata-arc-GRCh38.tar.gz "https://seekgene-public.oss-cn-beijing.aliyuncs.com/sgarc_demo/reference/refdata-arc-GRCh38.tar.gz"
# mouse
curl -C - -o refdata-arc-GRCm38.tar.gz "https://seekgene-public.oss-cn-beijing.aliyuncs.com/sgarc_demo/reference/refdata-arc-GRCm38.tar.gz"
# decompress
tar -zxvf refdata-arc-GRCh38.tar.gz

For reference genome construction, refer to How to Build a Reference Genome?.