Skip to content

Dataset 4(SeekOne DD scFAST-seq platform)

Author: SeekGene
Time: 2 min
Words: 222 words
Updated: 2025-07-14
Reads: 0 times

Sample Source:

Three cell lines mixed: A549:KRAS G12S;HCC827 EGFR 19del, K562: BCR-ABL1 fusion (1:1:1)

Experimental Method:

SeekOne™ DD Single-Cell Full-length RNA Sequence Transcriptome-seq Kit was used to perform single-cell separation, nucleic acid labeling, and capture on the SeekOne™ Digital Droplet System. The high-throughput single-cell transcriptome libraries were sequenced using the Illumina NovaSeq 6000 platform.

Data Analysis:

Raw sequencing data was converted to fastq format with Bcl2fastq, then low-quality data was filtered out using the fastp quality filtering software. The filtered sequencing results were analyzed with the SeekSoul Tools, generating intermediate files like single-cell library quality control results, expression matrices, and alignment results.

Data Download:

Analysis Report: Download

Expression Matrix: matrix: Download

Expression Matrix: RDS: Download

Raw Data: Download

  • md5: 878de2833feea2deb7d79224409d0d09 (Please be patient, raw data is large and may take some time to download)

Panel Raw Data: Download

  • md5: a99ba979b0c6ae6465539f2ce57ad5c2 (Please be patient, raw data is large and may take some time to download)
0 comments·0 replies